13 results

Determining the spatial distribution and abundance indices for Moreton Bay Bugs, Thenus parindicus and Thenus australiensis in Queensland to improve stock assessment and management

Project number: 2020-020
Project Status:
Completed
Budget expenditure: $596,710.00
Principal Investigator: Matthew McMillan
Organisation: Department of Primary Industries (QLD)
Project start/end date: 31 Aug 2020 - 30 Mar 2023
Contact:
FRDC
SPECIES

Need

Moreton Bay bugs (Scyllarid lobsters) are a commercially important fished resource in northern Australian coastal waters. About 600 tonnes of bugs is reported in logbooks annually, valued at about $15 million (~$25/kg) nationally. About 90% of the catch is taken in the Queensland east coast otter trawl fishery (QECOTF) (https://www.fish.gov.au/report/154-MORETON-BAY-BUGS-2018).

Historically, Moreton Bay bugs were retained as byproduct of prawn and scallop trawling, but over time their popularity and price have increased and they have become increasingly targeted by fishers. In recent years in the Queensland scallop fishery, the scallop catch has declined and fishers have targeted bugs to such an extent that their catch value now exceeds that of the scallops.

Quantifying the fishing effort targeted at bugs and differentiating it from the prawn and scallop effort is challenging. This complicates the estimation of reliable catch rate time series that can be used as an index of abundance for each group (i.e. bugs, prawns, scallops).

Despite their high value, Queensland has not previously undertaken a stock assessment of Moreton Bay Bugs, beyond yield-per-recruit analyses. This is largely because the Bug catch is composed of two species, reef bugs (Thenus australiensis) and mud bugs (Thenus parindicus) which are not differentiated by fishers in the logbook data. Mud bugs are the smaller of the two species and generally occur in depths of 10–30 m, while the larger reef bug generally occurs in depths of 30–60 m. Although there is some spatial separation of the species it is not possible to breakdown the catch of each from the logbook data alone.

This project aims to examine and define the spatial distribution of the two bug species. By surveying and sampling bugs, and examining seafloor properties, we hope to predict and map the distribution of each species. Once clear distinctions are made, we plan to use all available data on catch rates and gear technology used by the fleet, to derive standardised catch rate time series for each species, which can be used as indices of abundance for improved management and assessment.

Objectives

1. Implement a state-wide crew member program to obtain detailed photographic records of Moreton Bay bug catches, to assist with determining the species composition and distribution of catches.
2. Undertake a stratified survey of bug catch rates, species composition and seafloor properties in the main trawl fishing grounds off Townsville.
3. Use all available data sources to model, predict and map the spatial distribution of the two species of Moreton Bay bugs along the Queensland coast.
4. Produce long-term standardised catch rates for each bug species that can be used as an index of abundance for stock assessment and management.

Final report

ISBN: 978-0-6456352-1-8
Authors: McMillan M.N Leahy S.M. Daniell J. Louw N. Roberts E.M. Wickens M. Hillcoat K. O’Neill M.F
Final Report • 9.51 MB
2020-020-DLD.pdf

Summary

We report on the first comprehensive investigation into the spatial distribution of Moreton Bay Bugs within the Queensland East Coast Otter Trawl Fishery. This research was a collaboration between the Queensland Department of Agriculture and Fisheries and James Cook University, applying interdisciplinary approaches to successfully model habitat preferences of the two Moreton Bay Bug species and map their distributions along Queensland’s east coast. Historic catch records were then split according to each species’ spatial distribution. From these records, standardised catch rates were produced as indices of abundance for each species for use in future stock assessments of the Moreton Bay Bug fishery.

Environment

Custom training and technical support for the fishery stock assessment software ‘stock synthesis’

Project number: 2018-168
Project Status:
Completed
Budget expenditure: $77,220.00
Principal Investigator: Michael F. O'Neill
Organisation: Department of Primary Industries (QLD)
Project start/end date: 31 Mar 2019 - 29 Jun 2020
Contact:
FRDC

Need

The Queensland Government Department of Agriculture and Fisheries (DAF) aims to manage fisheries utilising the best available science taking into account environmental, economic, social and cultural impacts.
Through the Government’s Sustainable Fisheries Strategy (SFS, 2018–2020), plans are actioned to establish regular stock assessments (ongoing annually or at least every two years) to provide the science for assessing key fishery stocks against reference points.
To conduct regular stock assessments of finfish, Fisheries Queensland and the SFS expert panel have directed DAF staff to investigate the use of off-the-shelf stock-assessment models. This recommendation is for delivery of recurring information to support fishery harvest strategies; and followed a review to support the use of common stock assessment methods and models (FRDC Research Code: 2014-039; http://www.frdc.com.au/media-and-publications/fish/fish-vol-26-3/skills-shortage-forecast-for-stock-assessments). This proposal is to progress Qld’s adoption of FRDC recommendations and research: project 2014-039.
DAF’s training needs are by 31st May 2019.
The aim for this training is to build stock assessment systems for DAF and help support similar national needs in Australia.

Objectives

1. DAF scientists to learn SS methodology and assumptions.
2. After 5-day course, DAF scientists to be proficient in the use of SS software with R
3. Produce 3–4 updated DAF finfish stock assessments through the 5-day course
4. Publish on success, outputs and findings of SS
5. Improve speed on future reassessments of fish stocks

Final report

ISBN: 978-0-7345-0464-7
Authors: M. F. O’Neill R. Lovett P. Bessell-Browne S. Streipert G. Leigh A. Campbell A. Northrop J. Wortmann F. Helidoniotis W.-H. Yang M. Holden and S. French.
Final Report • 2020-02-01 • 2.75 MB
2018-168-DLD.pdf

Summary

This is a report on ‘stock synthesis’ software training by CSIRO. Noted are training outputs and learnings, together with an assessment of what role stock synthesis (SS) may play in Department of Agriculture and
Fisheries (DAF) fish stock assessments. Findings suggest SS could potentially assess 50–60% of the fish species currently listed for Queensland stock assessment.
Reports on SS herein represent initial views after training. SS views may change in time with individuals, and with more use and learnings of the software.

Assessing the spawning characteristics and reproductive biology of Pearl Perch (Glaucosoma scapulare) in Queensland

Project number: 2018-074
Project Status:
Completed
Budget expenditure: $376,154.78
Principal Investigator: Matthew J. Campbell
Organisation: Department of Primary Industries (QLD)
Project start/end date: 31 Mar 2019 - 30 Dec 2021
Contact:
FRDC

Need

This project addresses the national research priority "Ensuring that Australian fishing and aquaculture products are sustainable and acknowledged to be so", identified by FRDC as part of their RD&E Plan for the period 2015-2020. Further, this project addresses a research priority listed in FRDC's April 2018 Competitive round call for Expressions of Interest "To gain a better understanding of the spawning aggregations and dynamics of pearl perch". This project also addresses a Fisheries Queensland’s priority identified in their 2017 Monitoring and Research Plan "Research into lifecycle characteristics of pearl perch".

Outputs from a recent stock assessment suggested that the pearl perch stock, which extends southwards into New South Wales waters, is transitional depleted and stock recovery is necessary. This requires an improvement in egg production achievable through the protection of spawning animals. Knowledge of the pearl perch’s spawning dynamics would enable fishery managers to make evidence-based decisions regarding the harvest strategies that increase egg production and, therefore, build the stock biomass. For example, should patterns of pearl perch spawning aggregations be located, like those of the confamilial West Australian dhufish (belonging to the same taxonomic fish family), spatial closures could be employed to protect these aggregations. Similarly, temporal closures are currently used to avoid excessive fishing mortality on coral trout spawning aggregations and similar protection for pearl perch may be appropriate if spawning is timed to coincide with certain biological or seasonal cues. A thorough understanding of these spawning dynamics of the pearl perch is necessary to inform management of the species.

There is a need, therefore, to: (1) collect relevant biological information pertaining to the spawning dynamics of pearl perch, (2) supplement current information with fishery-independent data to better define temporal and spatial spawning patterns over the entire extent of the species’ distribution, and (3) identify areas likely to support spawning aggregations, if any, and to assess the movement to and from these spawning aggregations.

Objectives

1. Assess the temporal and spatial trends in the reproductive biology of pearl perch
2. Determine the movement of spawning pearl perch using both conventional and acoustic tagging methods
3. Identify areas, if any, that support spawning aggregations and determine the relative importance of these aggregations to the sustainability of the pearl perch stock

Final report

Author: Matthew Campbell
Final Report • 2023-11-27 • 5.62 MB
2018-074-DLD.pdf

Summary

Assessing the spawning characteristics and reproductive biology of Pearl Perch (Glaucosoma scapulare) in Queensland 

Barramundi origins: determining the contribution of stocking to the Barramundi catch on Queensland's east coast

Project number: 2018-047
Project Status:
Completed
Budget expenditure: $261,776.73
Principal Investigator: Susannah Leahy
Organisation: Department of Primary Industries (QLD)
Project start/end date: 31 Oct 2018 - 31 Jan 2021
Contact:
FRDC
SPECIES

Need

This EOI was developed to address the priority, listed by Queensland RAC in the November 2017 Call for Applications, "To Determine the Proportion of Queensland East Coast (Marine and Estuarine)
Wild Barramundi Catch that is of Hatchery Origin"

- Since 2010 at least 4 million barramundi fingerlings have been released into impounded waterways, coastal lagoons, rivers (and estuaries) of Queensland

- the number of barramundi released annually varies between ~330,000 (2010) and ~794,000 (2015)

- whilst stocked fingerlings may suffer high mortality rates, stocked barramundi do migrate downstream and are caught in the wild-harvest commercial net fishery

- the magnitude of the contribution of stocking to the Queensland east coast population of barramundi is unknown

- this problem has limited quantitative stock assessment of barramundi on the Qld east coast

- DNA parentage analyses is a way to unequivocally identify hatchery origin barramundi and has been developed and validated for barramundi at JCU but it relies on having genotypes of the hatchery broodstock and is expensive per fish

- to be useful for a stock assessment any method needs to be able to be applied over multiple years to provide a time series of data, preferably hind-casting using the historic otolith collections maintained by Fisheries Queensland

- the aim of this project is to develop a cheap and effective method to identify the contribution of stocked fish to current and historic catches (via the Fisheries Queenlsand's otolith collections) to support stock status reporting and quantitative stock assessment

Objectives

1. To develop a near infrared spectroscopy model that can distinguish between wild origin and hatchery origin barramundi
2. To develop an otolith chemistry model that can distinguish between wild origin and hatchery origin barramundi
3. To compare the results from the models developed in #1 and #2 against an established method (genetics) to distinguish between wild and hatchery origin fish in wild caught barramundi
4. To evaluate and complete a cost-benefit analysis of the approaches developed

Final report

ISBN: 978-0-7345-0474-6
Authors: Leahy SM Jerry DR Wedding BBC Robins JB Wright CL Sadekov A Boyle S Jones DB Williams SM McCulloch MT Grauf S Pavich L McLennan M Sellin MJ Goldsbury J Saunders RJ
Final Report • 2022-02-24 • 5.66 MB
2018-047-DLD.pdf

Summary

Researchers from Queensland’s Department of Agriculture and Fisheries, James Cook University, and the University of Western Australia tested a range of otolith-based and genetic methods to identify hatchery-born from wild-born Barramundi. The project took place in the Dry Tropics region, where extensive historical and ongoing impoundment stocking (release of hatchery-born Barramundi into freshwater bodies) may be contributing to the downstream wild-capture marine and estuarine fishery. Fish samples were collected from the commercial and recreational wild-capture marine and estuarine fishery in 2019 and 2020, following the major Townsville floods in February 2019. The team identified a cost-effective means of using trace elements in fish otoliths to reliably distinguish hatchery-origin from wild-origin fish, measure the contribution of stocked fish to the wild population, and assess the sustainability of the wild-capture fishery.

Investigation and improvement of live Blue Swimmer Crab handling in NSW

Project number: 2018-024
Project Status:
Completed
Budget expenditure: $102,107.00
Principal Investigator: Paul Exley
Organisation: Department of Primary Industries (QLD)
Project start/end date: 1 Apr 2019 - 27 Aug 2020
Contact:
FRDC

Need

As the NSW fishing industry moves forward into the future with quota managed fisheries, there is a need for industry to develop procedures and process on catching, holding and transporting Blue swimmer crab that would value add to the wild harvest sector’s product – particularly for the live sales market.

The current market is predominantly made of sales of cooked and raw blue swimmer crabs. An approx. price range of blue swimmer crab for 2015 / 2016 was $8.50 $9.00 per kilo. The live trade in blue swimmer crab in 2016 / 2017 is approx. $20.00 per kilo. A move to selling into the live market would provide a better return for effort and would help in maximizing return on investment in the blue swimmer crab quota fishery.

The “Live Blue Swimmer Crab” trade is in its infancy and it is timely to invest in technologies that will assist in lowering the mortality rates of these animals. Any investment now will accelerate the development of this fishery and ensure the best chance for the restructure of the NSW fishery to achieve its goals.ie viability and efficient use of a quota species.

The industry needs to have an easy to read handling guideline developed and training workshops to improve their access to the market and reduce mortality rates.

Objectives

1. To produce handling guidelines and conduct a series of industry training workshops to reduce the mortality rate of blue swimmer crabs and thereby increase the volume of live product to market
2. To improve fishermen returns who adopt the guidelines and undertake the training provided

Final report

Author: Paul Exley and Donna Cawthorn
Final Report • 2025-02-19 • 2.65 MB
2018-024-DLD.pdf

Summary

This report presents pivotal findings from an in-depth investigation into optimising live handling practices for the commercial Blue Swimmer Crab  (Portunus armatus) industry in New South Wales (NSW), with the overarching goal of unlocking high-value live trade opportunities. Initiated in 2019, the research was conducted by an experienced team of scientists at the Queensland Department of Primary Industries (DPI) in Coopers Plains, Brisbane. The primary objective was to develop effective handling protocols to improve the survival rates of Blue Swimmer Crabs from capture to market, thereby increasing the volume and quality of crabs available for sale. The study combined extensive literature review, laboratory trials and stakeholder engagement to provide a practical framework for fishers wishing to pursue the live Blue Swimmer Crab market, focusing on methods to reduce stress, minimise mortalities and maximise marketable yields.

Industry
PROJECT NUMBER • 2017-238
PROJECT STATUS:
COMPLETED

Water treatment to control influent water biosecurity risk on Australian prawn farms. Effectiveness and impacts on production ponds.

This project assessed the performance of mechanical filtration as a means by which Australian prawn farmers could lower the risk of disease agent transfer into farms by selective removal of disease hosts and other vectors naturally present in farm source water. The project sought to provide...
ORGANISATION:
Department of Primary Industries (QLD)
People
Industry
PROJECT NUMBER • 2017-057
PROJECT STATUS:
COMPLETED

Stock predictions and spatial population indicators for Australia's east coast saucer scallop fishery

This project undertook analyses to understand the role of overfishing and the environment on saucer scallops. The analyses indicated reduced numbers of spawning scallops. Historical levels of fishing and environmental influences such as from increased sea surface temperatures (SST) have amplified...
ORGANISATION:
Department of Primary Industries (QLD)
Industry
PROJECT NUMBER • 2017-048
PROJECT STATUS:
COMPLETED

Improving mortality rate estimates for management of the Queensland Saucer Scallop fishery

This research was undertaken on the Queensland saucer scallop (Ylistrum balloti) fishery in southeast Queensland, which is an important component of the Queensland East Coast Otter Trawl Fishery (QECOTF). The research was undertaken by a collaborative team from the Queensland Department...
ORGANISATION:
Department of Primary Industries (QLD)
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