Ralf Yorque Symposium and Ecopath with Ecosim Training Course
Australian Government and industry have many objectives of Australia’s natural resources. Amongst their highest priorities are the sustainable use of Australian resources. Reassuring the public that this is being achieved can be difficult, however, as many of Australia’s resources are poorly known – even 18% of reasonably well known species are of unknown stock status (Georgeson et al 2014). This means that new and developing sectors, attempting to exploit resources in a new way, or targeting species that have not previously been considered main target species can come under considerable stakeholder scrutiny and public debate (as seen in the Small Pelagic Fishery in the last few years). Such situations will not ease under climate change as ecosystem restructuring will mean the mix of target species will need to shift, making the most of new opportunities, if Australian fisheries are to remain sustainable (Fulton and Gorton 2014).
To this end schemes that support responsible fisheries management of developing fisheries or small-scale, data-constrained fisheries are an important new tool needed to achieve Australian objectives for sustainable fisheries. Such a scheme will require the development of management approaches that more effectively incorporate the diverse and potentially conflicting needs and effects across all sectors accessing Australian stocks. It is already understood that management will need to more explicitly acknowledge the role of ecosystem integrity in delivering sustainable stocks and that new multispecies harvesting regimes will be required (Zhou et al 2010, Garcia et al 2012). However, the true form of such harvesting remains uncertain and any approach will need to allow for adaptive learning. Consequently, there is a need to design multispecies harvesting schemes and self-learning adaptive management approaches.
In addition to new approaches a broader set of the management and fisheries science community needs to be at ease with ecosystem oriented tools, such as Ecopath with Ecosim. Training in the latest versions of the software by those most intimately associated with it is an important step in that direction for fisheries science professionals from all jurisdictions.
Final report
This report summarises the outcome of a Ralf Yorque symposium – a small fairly informal series of workshops aimed at providing the big picture thinking space needed to underpin multi-year, multi-project research programs that incrementally piece together the necessary components of a pragmatic, practical and effective means of delivering sustainable fisheries – across ecosystems, for data poor and data rich species alike, in the context of climate and other cumulative pressures on Australian and global ecosystems.
Such an exercise is not a trivial undertaking and benefited from synthesizing current understanding, drawing insights from the last 40-50 years of the development of adaptive management and to scope what would be required of the design of a self-learning adaptive management approach for developing fisheries or fisheries with limited access to data.
What data how? Empowering and engaging industry to ensure the needs of contemporary fisheries data are achieved
The proposed project responds to QFRAB Research Priority IV – Improve the relevance and quality of the data collected to underpin effective science based management of Queensland fisheries.
Traditionally fisheries data moved in a single direction, with fishers collecting data that are used by researchers and managers to manage fishers’ activities within sustainable long-term goals. Historically this was a sound system that informed the management of fisheries and enabled the development of suitable management objectives and tools (input and output controls).
A paradigm shift has occurred with contemporary fisheries data being utilised for multiple purposes other than QDAFF core business management and includes conservation objectives (EPBC Act), marine spatial planning, third party accreditation's, impact assessments and resource allocation. Not surprisingly, the quality and relevance of data collected is increasingly being questioned by all stakeholders. Given this notable shift in the interest and demands on fisheries data, it is timely that new and novel data and data collection methods are investigated, and existing systems are reviewed and improved to better meet contemporary needs. Further, increasing distrust of fisheries data by stakeholders is a significant hurdle in monitoring, assessing and managing fisheries. Concerns about the accuracy of commercial logbook data and catch estimates derived from recreational diary and phone surveys persist. Options for empowering all fishery stakeholders in the design of collection methods, data ownership and utility of data beyond core business requirements need to be explored to improve data quality and stewardship, and confidence in assessments/analyses that utilise these data.
Final report
Physical oceanographic influences on Queensland reef fish and scallops
There is a strong need for Queensland fishery managers to obtain a better understanding of key physical oceanographic influences on target species of commercial and recreational fisheries.
Tropical cyclones have been associated with reef fish catch rates. Coral trout (Plectropomus leopardus) catch rates typically fall after a major cyclone, while those of red throat emperor (Lethrinus miniatus) rise (see “Background” above). The effects on catchability can last several years. While the exact causal mechanism is not known, it is thought to be related to water temperature.
Nutrient-rich cold water eddies, which break from the East Australian Current and move westward onto the Queensland continental shelf are likely to affect the spat settlement, growth, abundance and catch rates of saucer scallop (Amusium balloti). Understanding these relationships may lead to improved management, assessment and forecasting of catch in these fisheries, and it may also lead to improved acceptance of quantitative stock assessment results by industry.
This proposal differs from previous abiotic studies because it focuses more on offshore, oceanic influences, rather than coastal rainfall and flow data.
Final report
Evaluating candidate monitoring strategies, assessment procedures and harvest control rules in the spatially complex Queensland Coral Reef fin-fish Fishery
Appropriate monitoring strategies and harvest control rules are needed to ensure sustainability and
maximum economic benefit from the coral trout stocks in the Queensland Coral Reef Fin fish Fishery
(CRFFF). This is not an easy accomplishment in a fishery that is as spatially complex as the CRFFF,
and so in order to determine whether monitoring programs and harvest control rules are worth
implementing, it is better to try several techniques on a virtual fishery before doing so in reality. This
can be done by testing alternative procedures in a Management Strategy Evaluation (MSE) framework.
The project will test in an MSE framework the effectiveness of:
1. several potential monitoring and sampling regimes of the coral trout stock, including the existing
Long Term Monitoring Program (LTMP) surveys,
2. different ways of analysing the data collected from a monitoring program, and
3. candidate harvest control rules that translate the perceived state of the fishery into a TAC.
Comparisons of alternative monitoring, analysis and harvest control rules will help DEEDI assess their
cost effectiveness. Lastly, since quota trading was introduced, industry has stressed the fact that the
economic conditions of the fishery have changed substantially, and so an update of economic data is
needed urgently for the evaluation of the above management strategies to be relevant and useful.
Final report
Development of an individual transferable catch quota model for the Coral Reef Fin Fish Fishery of the Great Barrier Reef
One of the major research priorities of QFIRAC, REEFMAC, QFS, GBRMPA, and other fisheries' stakeholders of the GBR concerns the need to develop innovative approaches for determining the sustainability of the fisheries for the exploited reef fish species, particularly the major target species of the GBR Coral Reef Fin Fish Fishery, common coral trout and red throat emperor. This need has become even more pronounced with the recent release of the management plan for the fishery, which is largely dependent upon an Individual Transferable catch Quota (ITQ) system and the impending GBRMPA Representative Areas Program (RAP). A model involving complex effort dynamics associated with an extensive system of "no-take" areas and a significant recreational harvest (e.g., unlike the SE Trawl Fishery) that provides a framework for setting appropriate Total Allowable Catches (TACs) and evaluating their impacts has yet to be developed.
This proposal, therefore, arose in response to major concerns for the sustainability of the GBR Coral Reef Fin Fish Fishery. It addresses directly QFIRAC's key R&D priorities in sustainability assessments by developing innovative assessment methodologies, sustainability indicators for target species in commercial fisheries, and using a Management Strategy Evaluation (MSE) approach. The "standard" approach to providing management advice for fisheries managed using ITQs involves, for each target species, fitting a population dynamics model to data collected for large geographic areas and calculating catch limits according to pre-specific decision rules (such as F0.1). However, this approach is likely to fail to achieve the management objectives for the GBR Coral Reef Fin Fish Fishery because it ignores spatial heterogeneity in population structure and the multi-species and multi-sector nature of the fishery. Also, the data typically required to apply these methods is not available for the GBR Coral Reef Fin Fish Fishery. In addition, little is known about the bioeconomic impacts and sophisticated effort dynamics associated with an ITQ managed multi-species, multi-sector fishery such as the GBR Coral Reef Fin Fish Fishery.
Consequently, we propose to extend the MSE framework developed as part of the CRC Reef Effects of Line Fishing (ELF) Project and other related FRDC funded projects (1997-124, 1998-131, 2001-020). Results from this project will inform stakeholders and decision makers about the bioeconomic trade-offs associated with a variety of alternative rules for setting TACs. This is exactly the type of information required as the basis for the selection of monitoring strategies and decision rules. This project, therefore, will provide a management tool by which appropriate TACs can be evaluated given alternate harvest strategies related to effort displacement caused by the RAP and the significant recreational harvest.
Final report
National Strategy for the Survival of Released Line Caught Fish: investigating survival of fish released in Australia’s tropical and subtropical line fisheries
The report by McLeay et al. (2002) (“National strategy for the survival of line-caught fish: a review of research and fishery information”) summarises the need for this research as follows:
“The commercial and recreational line fisheries are the most highly participatory of all Australia’s fisheries. They are managed by a complex array of regulations, including size and catch limits, which create a high potential for captured fish to be released. The growing interest of recreational and charter fishers in catch-and-release practices has also increased release rates of line-caught fish. The susceptibility of line-caught fish to post-release mortality (PRM) is largely unknown, and is not taken into account in most current stock assessments”.
Perhaps half of the fish caught by line in Australia are released, for a variety of reasons including minimum legal sizes, bag limits, catch-release philosophy etc. However, we have little idea of how many of these die as a result of hook damage, inappropriate handling, barotrauma or capture stress, nor what effect this source of ‘cryptic’ mortality will have on the long-term sustainability of the various fisheries.
While there is good information on release rates in the recreational line fishing sector there is also a need to test the supposition that the commercial sector catches few undersized fish and also establish any differences between the general recreational community and the charter sector.
To more realistically appreciate the full effect of line fishing on the various species, the released catch needs to be described and quantified, and an attempt made to estimate post-release survival (PRS) rates. Alternative capture methods (hook designs) need to be tested, to determine whether a change in apparatus (via regulation or a Code of Practice) could reduce the catch of undersized fish. Pre-release handling and barotrauma relief procedures need to be evaluated to determine whether any changes may increase survival of fish returned to the water.
Final report
Experiments were conducted in northern, central and southern Queensland to investigate the effects of hook design and size on the incidence of hooking injury, and the effects of a number of factors, including barotrauma-treatment method, on post-release survival rates of a suite of key reef-associated demersal fish species of particular importance to Queensland’s reef line fishery. The key species examined were common coral trout (Plectropomus leopardus), redthroat emperor (Lethrinus miniatus), crimson snapper (Lutjanus erythropterus), saddletail snapper (Lutjanus malabaricus), red emperor (Lutjanus sebae) and spangled emperor (Lethrinus nebulosus).
The work comprised four components:
(i) Analysis of existing datasets in terms of discarding/release rates in the commercial, recreational and charter sectors and estimation of barotrauma treatment effects;
(ii) Field trials to determine experimentally the effects of three hook patterns (J-hooks, offset circles and non-offset circles) and two sizes (small: 4/0 or 5/0, and large: 8/0) on hooking injury, location of hook lodgment and catch rate;
(iii) Field experiments using specially-developed vertical floating enclosures to test short-term (3-day) survival rates of fish treated to relieve barotrauma by venting or shotline releasing;
(iv) A community-based tag-release-recapture experiment involving recreational anglers to test the effects of barotrauma treatment and other covariates on long-term (months to years) post-release survival.
Discarding rates of some species have increased since 1997 largely as a result of increases in legislated minimum legal size limits and the introduction of maximum size limits. In December 2003 the minimum legal size (MLS) limit for red emperor was raised significantly, from 45 cm (TL) to 55 cm. Concurrent increases in MLS of bluespot coral trout, redthroat emperor and spangled emperor did not result in an observable change in discard rate. By 2005 the reported recreational discarding rates for coral trout, redthroat emperor, spangled emperor and saddletail snapper ranged between 42% and 55%, but for crimson snapper the rate was 69%, and for red emperor it was 83%. Between 1989 and 2003 some 300–620 t of coral trout and 33–95 t of redthroat emperor were discarded annually by the commercial reef line fishery on the GBR. Modelling of potential high-grading after the introduction of a (competitive) total allowable commercial catch for coral trout indicated that discarding of this species could increase to as much as 3,900 t. Spatial (but not temporal) differences in discarding rates were significant, and modelling indicated a potential for large increases in discarding rates and subsequent cryptic mortality as a result of changes in management arrangements.
The effects of hook pattern varied between species, with no consistent significant trends. Across all species only a relatively small proportion of fish (< 4%) were deep-hooked (in the throat or gut). Small hooks (5/0 circle and 4/0 J-hooks) were more likely to lodge in the lip or mouth than large hooks, although the effect was weak. Crimson snapper were significantly less prone to damage from non-offset circle hooks than either of the other patterns, but the opposite trend occurred with saddletail snapper. There was also a weak tendency for coral trout to sustain more injuries when captured on J-hooks or offset circle hooks than on non-offset circles. Hook size showed a more consistent trend, with large (8/0) circle or J-hooks being more frequently associated with injury than small hooks in all species, but this was statistically significant only in coral trout and blackblotch emperor.
Our controlled short-term (3-day) field experiments revealed that hook location was a major determinant of short-term survival in coral trout, crimson snapper and saddletail snapper. Even when the hooks were left in place according to best practice procedures, survival rates among deep-hooked fish were considerably reduced compared to those hooked in the mouth or lip. The modelled survival rates of shallow and deep-hooked fish repectively were as follows: coral trout 81 and 50%, redthroat emperor 86 and 59%, crimson snapper 96 and 35%, and saddletail snapper 73 and 38%. This represents an overall reduction across species in survival rate of around 50% as a result of deep hooking, even when the hooks were left in place. The results of our hooking damage experiment showed that the incidence of deep hooking was generally low across the species examined (< 4%), so that the predicted added mortality due to deep hooking would be in the order of 0.04 × 0.50, or 2%. However this figure probably underestimates the actual value, as not all anglers are prepared to cut their hooks off if the hooks have become lodged in the gullet or gut. It is also likely that the higher level of angling skill among researchers conducting the hooking trials accounted for a lower incidence of deep-hooking than might be expected across the general angling community.
Keywords: Released fish, Hook design, hooking injury, barotrauma, post-release survival, demersal fish species, reef line fishery, Coral Trout (Plectropomus leopardus), Redthroat Emperor (Lethrinus miniatus), Crimson Snapper (Lutjanus erythropterus), Saddletail Snapper (Lutjanus malabaricus), Red Emperor (Lutjanus sebae) and Spangled Emperor (Lethrinus nebulosus)
Modelling multi species targeting of fishing effort in the Queensland Coral Reef Finfish Fishery
The Coral Reef Fin Fish Fishery (CRFF) is a multi-species line fishery. Until recently there have been substantial gaps in our knowledge of the biology of even the major target species of the line fishery and considerable uncertainty about the impacts of current levels of fishing on the harvested stocks.
The CRC Reef Effects of Line Fishing (ELF) Project has provided an improved understanding of: i) the biology of the major target (coral trout and the red throat emperor) and by-product species (stripey bass, moari wrasse, barramundi cod, lesser serranid spp, etc) and, ii) the characteristics and fishing practices of the different sectors of the fishery. One of the main tools for delivery of the outcomes of the ELF Project is ELFSIM, a set of simulation models that will be used to evaluate alternative management strategies against specific objectives for common coral trout.
Given the multi-species nature of the CRFFF, there is a need to address the implications for the effectiveness of alternative management strategies of fishers harvesting different species, with divergent distributions and biology, either by targeting or as a significant by-product when targeting other species. This is especially relevant on GBR where many species have different spatial distributions and area closures are a prominent management strategy that directly affects the distribution of fishing effort. An example of a potential management strategy that includes criteria for which coral trout and red throat emperor differ substantially is the proposed spawning closures currently being considered by REEFMAC. The proposed closures target the peak spawning period for common coral trout (October-November). This period does not, however, include the majority of the spawning season for red throat emperor (July-September). The potential effects of the closures, if implemented, on the harvest of either species, the spatial distribution of effort and impact on the fish stocks are unknown. The models proposed in this task will provide a formal context in which to examine the range of potential responses.
Previously our capacity to address the multi-species nature of the fishery was limited by a paucity of information (for target species and fishing practices) and lack of a formal framework (management strategy evaluation (MSE)) to do so. This project is a strategic requirement to explicitly incorporate the multi-species nature of the CRFF in the evaluation of alternative management strategies for line fishing on the GBR. While this project focusses on the CRFF, the tools developed will provide the basis for extension to include other species of the line fishery or application to other fisheries. This project directly addresses QFIRAC objectives 1.8, 3.2, 3.4, 3.5 & 5.4 and ReefMAC’s and GBRMPA's concern for management of the diversity of impacts of the line fishery on species other than coral trout.