Aquatic Animal Health Subprogram: Optimisation of PCR tests for diagnosis of megalocytivirus (gourami iridovirus) and cyprinid herpesvirus 2 (goldfish herpesvirus)
Megalocytivirus
In 2003 there was an outbreak of iridovirus in farmed Murray cod in Victoria that caused 90% losses. In 2004 these viruses were found in imported ornamental fish - gourami. These have established breeding populations in the wild in Australia and therefore may pose a threat to biodiversity in the Murray-Darling Basin and other systems in which Maccullochella sp. still exist. These viruses are not host specific and all Murray-Darling Basin sp. may be susceptible. Due to the risk to aquaculture, recreational fisheries and biodiversity, there is need to develop and validate diagnostic tests for GIV in order to enable rapid accurate detection of GIV, facilitate surveys of Murray cod and imported ornamental fish to improve risk assessment and conduct surveys of free-living and farmed fish in Australia. The specific tests required include a robust and accurate PCR, and cell culture. These tests need to be able to distinguish GIV from related iridoviruses such as RSIV.
CyHV-2 of goldfish
In the last 10 years imported goldfish numbers have continued to grow, in part, due to their competitive price. The imported goldfish have been subjected to the AQIS requirements for import certification and a 3 week holding period before release. Anecdotal evidence suggests that mortality rates of domestically produced goldfish increase when these fish are mixed in retail shops with imported goldfish. Investigations have revealed pathology consistent with CyHV-2. Imported goldfish may carry latent CyHV-2 infections. This project aims to provide the diagnostic capability and a sampling regime to further investigate these concerns.
The project relates directly to Strategies 1, 2 and 3 in Aquaplan 2005-2010 and meets key research area 7.2.1 in the FRDC Aquatic Animal Health Sub Program Research and Development Plan 2002-2008 (updated June 2005).
Final report
Sustainability of recreational fisheries for Murray cod in the Murray Darling Basin
Murray cod is Australia’s highest profile freshwater fish species and there is a very high public expectation that fisheries for this species are managed sustainably.
There is general agreement that cod numbers have declined considerably since European settlement and whilst the exact reasons may be varied, it is clear that continued harvest is one identifiable factor that has the potential to hinder recovery. However, there is general uncertainty about a number of critical issues relating to the management of these fisheries.
A number of information gaps have been identified in relation to the recreational fisheries as follows;
- There is broad detail available on gross angler harvest but there is no detailed information on catch related to individual rivers or basins, or the level of indigenous use .
- The LML of 50cm is a critical issue as evidenced by the rapid decline in numbers of fish above this level. This also means that the survival of released fish is highly relevant.
- There is a lack of information on population structure and dynamics and, with particular reference to recreational fisheries management, there is uncertainty regarding size at maturity and whether this is constant across the basin.
Current regulations may allow the removal of fish that are sexually immature. At low fishing pressures, this may be tolerable, however, at high fishing pressure, removing spawners before they mature may threaten a stock. The management of Murray cod populations requires that the LML chosen must be robust to both fisheries management and conservation requirements, but there has been no assessment to determine the appropriate LML for sustaining these fisheries.
The information from the size at maturity as well as harvest levels and hooking survival estimates will enable the impacts of recreational fishing on cod populations to be determined via management scenario testing.
Final report
An ecological approach to re-establishing Australian freshwater cod populations: an application to trout cod in the Murrumbidgee catchment
Management of many Australian freshwater recreational fisheries involves supplementation of existing populations or attempts to establish new populations through the release of fingerlings. Conservation management of threatened freshwater species also relies heavily on the release of fingerlings to establish new populations. Australian and overseas studies have repeatedly demonstrated that fingerling stockings succeed in a limited number of cases and often the success of these programs is difficult to evaluate with conventional approaches. The factors and stocking strategies that can enhance the chances of fingerling stockings being successful are only just starting to be investigated in Australia (see FRDC Project 1998/221 “Impoundment stocking strategies for eastern and northern Australia”).
This project provides an opportunity to explore the possibility of re-establishing adult cod populations through seeding with fewer but much larger individuals (not fingerlings). The research has particular relevance to Australian freshwater cods as apex predators that may serve as indicators of river system health. Additionally, the study species, Trout Cod is Australia’s most imperiled cod species. It was once an important recreational species and a component of the inland commercial fishery of the Murray-Darling Basin. Today extensive efforts to recover the species and establish new populations remain limited by our lack of understanding of what happens to stocked individuals during sub-adulthood.
Final report
Aquatic Animal Health Subprogram: enhancement of the emergency disease management capability in Victoria - developing a Victorian Control Centres Management Manual
The effect of barramundi Nodavirus on important freshwater fishes
Susceptibility of freshwater fishes to barramundi nodavirus.
- There is a need to address concerns about the risk of possible lethal transmission of barramundi nodavirus to freshwater fishes already under threat in their natural habitat.
- Important freshwater fishes will be exposed to the nodavirus from cell cultures to determine their susceptibility.
- By using the OVL isolation facility in Townsville, well outside the Murray-Darling region, there is minimal risk to the natural fish populations.
- Confirmation that barramundi nodavirus can cause lethal infections in freshwater fishes will strengthen the application of strict licence conditions on barramundi farming in southern Australia.
- Confirmation that barramundi nodavirus does not affect freshwater fishes will possibly allow expansion of the barramundi farming into regions needing new sustainable economic development.
A barramundi infection model.
- To establish a realistic virus dose and route of infection for the challenge trials, an infection model using barramundi will be developed.
- OVL has ready access to barramundi larvae and fry of all ages.
- The model is also necessary to help quantify the effect of virus exposure to disinfectants and different environmental conditions.
What is the viability of barramundi nodavirus?
- Fish health management requires good information on how to effectively decontaminate facilities following outbreaks of VNN.
- Knowledge of the persistence of barramundi nodavirus in the environment will allow fisheries managers to decide on effective conditions for barramundi farming licences that minimise the risk of transferring virus outside the culture facility.
Sensitivity of the cell culture isolation system.
- While sensitive detection tests are available, the barramundi cell line offers a more practical diagnostic method that can be used by any laboratory with cell culture/ virology capability.
- An evaluation of the cell culture isolation system’s ability to detect virus in carrier (no disease) fish, and standardization of the cell culture presentation, is required before the method can be recommended.
Final report
This project has confirmed the knowledge that management of barramundi translocations outside their natural range requires fisheries authorities take into account the risk that barramundi nodavirus may lethally infect native freshwater fishes. The project has shown barramundi nodavirus can multiply and spread throughout the body of freshwater fishes, and that the spread of infection from fish to fish is a possibility in freshwater.
The project has created knowledge on the Australian application of a sensitive molecular detection test for nodavirus in healthy fishes. This knowledge has lead to industry and government support for further research on diagnostic test development for nodaviruses which will lead to a national Standard Diagnostic Procedure. Further, this knowledge has led the barramundi hatchery sector to support a research project applying the molecular detection test to screen captive barramundi breeders for nodavirus with the aim to produce nodavirus-free barramundi fry.
Live export opportunities for value-adding of Australian freshwater and estuarine fishes
Preliminary estimates indicate that South Australia's inland/estuarine commercial fishers may be missing out on $3.5-24.5million annually from their relatively static finfish production, representing 67%-540% of the current domestic landed value - all from the lack of a readily available, robust live transport technology! This likely translates to proportionately greater export losses nationally - and missed Industry earnings for reinvestment. At the same time, experts (see FRDC Project Report 92/125.26) indicate much research is already complete. However, for Australian inland/estuarine finfish, no well evaluated and packaged system exists to make live export marketing happen now.
Despite the massive value-adding success from export of quality marine fish products to high demand Asian and other overseas markets, Australian freshwater parallels have not been developed. Production potential from freshwater and estuarine wild capture fisheries has limited capacity to expand, therefore, industry profitability incentives must focus on obtaining greater return on sustainable harvest. Australian freshwater and estuarine fishes are consistently and depressingly undervalued relative to equivalent species on overseas markets (eg, black bream seldom exceed $14A/kg on the South Australian market despite a 96% reduction in harvest since the 1970's while the almost identical Japanese or sea bream, Acanthopagrus latus, regularly returns $45US/kg in Asian metropolitan markets).
Concurrently, development of aquaculture capacity for these same freshwater and estuarine species lags behind higher return marine counterparts due to inadequate profit incentives. This is particularly evident given that similar species worldwide are typically more robust to culture conditions and therefore first to be cultured.
Successful development and transfer of live shipping technology for key Australian freshwater and estuarine species to both wild capture and aquaculture industries has the capacity to overcome these current limitations. Live marketing of wild production can harvest export value, increase profitability per unit production, and provide an identical mechanism for development of a parallel domestic market. Typically, export initiatives provide extremely strong incentives for continuous improvement of product quality. Success in a foreign market also provides excellent protection of our home markets through competitive advantage. The profit incentive of elevated prices domestically and abroad will necessarily spur development of cultured production of these same species.