14 results

Understanding the risks associated with climate change on infectious diseases affecting the seafood industry

Project number: 2022-029
Project Status:
Current
Budget expenditure: $519,631.00
Principal Investigator: Joy Becker
Organisation: University of Sydney (USYD)
Project start/end date: 31 Mar 2024 - 29 Jun 2026
Contact:
FRDC

Need

Fish and aquatic species play a vital role in global food security by providing nearly 17% of animal protein eaten by people. However, freshwater and marine aquatic ecosystems that sustain aquaculture and fisheries are undergoing significant changes as a result of global warming of our atmosphere and oceans with projections suggesting that these changes will be heightened in the future (Bahri et al., 2018). It is estimated that global marine primary production (ie phytoplankton) which underpins the health and sustainability of all marine ecosystems will decline by 6 +/- 3% by 2100 (Bahri et al., 2018). This decline in primary productivity will result in key vulnerabilities in aquatic food production that contribute to global food security. Climate-driven changes in temperature, precipitation, ocean acidification, incidence and extent of hypoxia and sea level rise, amongst others, are expected to have long-term impacts in the aquaculture and fisheries sectors at multiple scales (Bahri et al., 2018, Fulton et al., 2020).

Australia’s marine environment is changing faster than at any other period in recorded history (Fulton et al., 2020). In the last 100 years, Australia's oceans have warmed by 1C and there are identified hotspots located in southeast and southwest Australia which have warmed by 2C (Hobday et al., 2018). The surface sea temperatures around Australia are expected to increase by another 1 to 2C in the north and 2 to 5C in the south over the next 100 years (Hobday et al., 2018). While the warming is predicted to continue, the specific mixes of atmospheric and ocean current patterns around Australia mean the magnitude of climate change will differ place-to-place, and different aquaculture and fisheries and sectors will face different challenges (Fulton et al., 2020).

Biological and ecological impacts of climate change on aquatic ecosystems include shifts in food resources, habitat availability and fluctuations in species distributions (Bahri et al., 2018, Fulton et al., 2020). The FAO (Bahri et al., 2018) have identified that climate change may also bring increased risks for aquatic animal health (e.g., by changing the abundance and virulence of pathogens or the susceptibility of the host to pathogens and infections) and food safety concerns (e.g., faster growth rates of pathogenic marine bacteria, or the incidence of parasites and food-borne viruses).

The project proposed will use a risk analysis framework applied at the sector-level to address the change in the risks of infectious diseases in Australian aquaculture and fisheries industries due to climate change. The project outcomes will identify and prioritize the risks from infectious diseases under the future climate scenarios. This project falls under the research priority to address sector-level mitigation strategies to support strategies for disease preparedness, biosecurity, and border protection. The project outcomes will assist industries in preparing risk mitigation strategies to build resilience and sustain productivity in Australia’s aquaculture and fishery industries.

References
Bahri, T., Barange, M., Moustahfid, H. 2018. Chapter 1: Climate change and aquatic systems. In Barange, M., Bahri, T., Beveridge, M.C.M., Cochrane, K.L., Funge-Smith, S., Poulain, F. (Eds), Impacts of climate change on fisheries and aquaculture: synthesis of current knowledge, adaptation and mitigation options. FAO Fisheries and Aquaculture Technical Paper No. 627. Rome, FAO, pp. 1-18.

Fulton EA, van Putten EI, Dutra LXC, Melbourne-Thomas J, Ogier E, Thomas L, Murphy RP, Butler I, Ghebrezgabhier D, Hobday AJ, Rayns N (2020) Adaptation of fisheries management to climate change Handbook, CSIRO, Australia.

Hobday, A.J., Pecl, G.T., Fulton, B., Pethybridge, H., Bulman, C., Villanueva, C. 2018. Chapter 16: Climate change impacts, vulnerabilities and adaptions: Australian marine fisheries. In Barange, M., Bahri, T., Beveridge, M.C.M., Cochrane, K.L., Funge-Smith, S., Poulain, F. (Eds), Impacts of climate change on fisheries and aquaculture: synthesis of current knowledge, adaptation and mitigation options. FAO Fisheries and Aquaculture Technical Paper No. 627. Rome, FAO, pp. 347-362.

Objectives

1. Confirmation and agreement of the 3 industry sectors for the risk assessment and establish the project steering committee
2. Determine the future climate scenarios for the key production areas for each industry sector.
3. Complete the systematic reviews, hazard identification and risk assessment for each industry sector under the future climate scenarios.
4. In collaboration with stakeholders from each sector, the project team will describe options for mitigation of risks identified under the climate change scenarios developed.
5. Deliver a workshop for each industry sector to inform and discuss project outcomes including potential mitigation strategies for Australian conditions.
6. Production of the non-technical project outputs (e.g. infographics and technical guide).
Industry
PROJECT NUMBER • 2019-208
PROJECT STATUS:
COMPLETED

2020-2025 Strategic Plan for the Australian Oyster Industry

The primary purpose of this plan is to coordinate oyster industry research, development, and extension (RD&E) across Australia to ensure that usable outputs are provided to oyster businesses. The plan outlines a set of RD&E programs and a list of priority projects for which research...
ORGANISATION:
Oysters Australia Ltd

South Australian Pacific Oyster selective breeding program: Building POMS resistance to reduce risk for the South Australian oyster industry

Project number: 2019-039
Project Status:
Completed
Budget expenditure: $936,428.00
Principal Investigator: Xiaoxu Li
Organisation: University of Adelaide
Project start/end date: 30 Jun 2019 - 29 Jun 2022
Contact:
FRDC

Need

Due to the recent detection of POMS in wild Pacific Oysters in the Port River, the SA industry urgently need POMS resistant oysters. Having POMS resistant oysters stocked onto farms prior to any potential outbreak will be critical for protecting the industry from significant losses and financial impacts.

To achieve a resistance level of over 90% for ≥ one year old oysters, the SA Pacific Oyster selective breeding program will need to establish at least three more generations of families for genetic improvement after the completion of the Future Oysters CRC-P project in 2019.

Establishing the SA Pacific Oyster selective breeding program requires specific techniques and skills. SARDI is the only organisation in SA that has the purpose-built hatchery facility for this species and has produced target numbers of Pacific Oyster families over the last three seasons. SARDI also has a well-established team in oyster genetics and bivalve hatchery technologies.

To support the Stage 2 development of the SA selective breeding program, Flinders Ports, in partnership with the Fisheries Research and Development Corporation (FRDC), ASI, SAOGA and PIRSA-SARDI will jointly fund this project for the SA oyster industry to address POMS risks, and further mitigate the risk factors associated with the spread of POMS outside the Port River related to dredging activities in the Outer Harbour.

Objectives

1. Develop selective families with 90% POMS disease resistance for ≥ one year old Pacific Oysters
2. Support the SA industry by provision of high POMS resistant broodstock for commercial spat production

Final report

Authors: Penny Miller-Ezzy Mark Gluis Kathryn Wiltshire Marty Deveney and Xiaoxu Li
Final Report • 2024-07-01 • 2.76 MB
2019-039-DLD.pdf

Summary

A total of 221 new selectively bred families were produced at the South Australian Research and Development Institute (SARDI), West Beach, between 2019 and 2023, meeting project objectives. The 2019-year class was challenge tested in the Port River, SA for POMS resistance, after which the imported Tasmanian broodstock were incorporated into the program and the objective changed to improve both POMS resistance and POSS in SA. Details of the POSS field challenge tests and results will be available in the final report of FRDC project 2020-064. In the 2022 families, the last year class produced at SARDI, the average EBV of the top five POMS resistant families was 100% and the average EBV of the top five POSS families was 90%.
Adoption
PROJECT NUMBER • 2018-127
PROJECT STATUS:
COMPLETED

Validation and implementation of rapid test kits for detection of OsHV-1

Following the outbreak of Pacific Oyster Mortality Syndrome (POMS) in the Port River, South Australia in summer 2017-18, a need was identified for rapid diagnostic technology for OsHV-1, the causative agent of POMS. During the February 2016 OsHV-1 outbreak in Tasmania, tracing activities in...
ORGANISATION:
SARDI Food Safety and Innovation
Industry
PROJECT NUMBER • 2018-102
PROJECT STATUS:
COMPLETED

Understanding Ostreid herpesvirus type 1 risk: alternative hosts and in situ hybridisation

South Australia (SA) has a large edible oyster industry primarily growing Pacific oysters (Crassostrea gigas). The industry is regionally-based, an important employer and a substantial contributor to regional economies. Pacific oyster mortality syndrome (POMS) is a serious infectious disease of C....
ORGANISATION:
Flinders University
Industry
PROJECT NUMBER • 2018-097
PROJECT STATUS:
COMPLETED

Survey of Enterprise-level Biosecurity across the Australian Aquaculture Industry

The Australian Government Department of Agriculture and Water Resources (the department) commissioned the independent research company Instinct and Reason to conduct a survey aimed at farm owners/managers in the Australian aquaculture industry. The survey aimed to investigate the level of...
ORGANISATION:
Instinct and Reason

Improving early detection surveillance and emergency disease response to Pacific Oyster Mortality Syndrome (POMS) using a hydrodynamic model for dispersion of OsHV-1

Project number: 2018-090
Project Status:
Completed
Budget expenditure: $70,168.00
Principal Investigator: Shane D. Roberts
Organisation: Department of Primary Industries and Regions South Australia (PIRSA)
Project start/end date: 31 Jul 2018 - 31 Oct 2019
Contact:
FRDC

Need

Pacific Oyster Mortality Syndrome (POMS) is a disease caused by Ostreid Herpesvirus type 1 (OsHV-1) microvariant, which causes rapid high mortalities (up to 100%) in Pacific oysters. POMS has caused significant economic impacts to the oyster growing industry in parts of NSW and Tasmania where it occurs. On 28 February 2018 OsHV-1 was first detected in Port Adelaide River feral oyster populations. PIRSA and industry mounted an immediate emergency response aimed at containing the virus to the Port and preventing spread to the nearby oyster industry (>25km away).

In the absence of accurate information, surveillance designs and emergency response plans (including translocation protocols) assume a disease spread distance of 5NM (10km) to define epidemiological units for all water bodies (see Figure 1). That uncertainty causes policy makers to take a conservative approach. Consequently there is a need to improve the accuracy of predictive information used to manage such aquatic disease incursions.

Aim: Model the dispersal of Ostreid herpesvirus (OsHV-1) particles from various locations around South Australia to determine epidemiological units aimed at improving surveillance, biosecurity zoning and future emergency responses.

This project aligns with two key objectives of Australia’s National Strategic Plan for Aquatic Animal Health (AQUAPLAN 2014-2019): (1) Enhance surveillance, and (2) Strengthen emergency disease preparedness and response capability. See http://www.agriculture.gov.au/animal/aquatic/aquaplan.

A recent FRDC project (2006/005) demonstrated how various oceanographic data can be incorporated into a hydrodynamic model (e-SA marine system) to map past, present and future ocean conditions. This project proposal will provide a case study for how such a model can predict pathogen spread to underpin improved surveillance designs, effective emergency disease response and appropriate biosecurity zoning for translocation protocols.

Objectives

1. To model viral particle dispersal at key locations around the State, including commercial oyster growing areas, known feral oyster populations and ports, and incorporating seasonal oceanographic parameters
2. Using hydrodynamic model outputs, identify epidemiological units to inform surveillance, disease management and emergency disease response activities
3. Demonstrate how hydrodynamic model outputs of predicted viral particle dispersal can be used to develop a risk-based surveillance design for the detection of OsHV-1

Final report

ISBN: 978-1-876007-22-5
Authors: Shane Roberts Charles James Matthew Bansemer Frank Colberg Saima Aijaz Kaine Jakaitis Eric Schulz and John Middleton
Final Report • 2020-01-01 • 6.85 MB
2018-090-DLD.pdf

Summary

Rapid predictive capability of viral spread through water during an aquatic disease outbreak is an epidemiologist’s dream, and up until now has not been achievable. A biophysical particle tracking model for Ostreid herpesvirus 1 microvariant (OsHV-1) that causes POMS was developed to determine virus spread during disease outbreaks in South Australian coastal waters. Model outputs from 23 hypothetical outbreaks across the State have provided valuable information for PIRSA to review and update current Disease Management Areas (DMAs) for POMS. Outputs from this project will greatly enhance future disease surveillance programs and emergency responses.
Adoption
PROJECT NUMBER • 2017-233
PROJECT STATUS:
COMPLETED

Future Oysters CRC-P Communication and Adoption

The Future Oysters CRC-P project (CRC-P 2016-553805; Future Oysters) was funded by the Australian Government’s Business Cooperative Research Centres (CRC) Program, which is managed by the Department of Industry, Innovation and Science (DIIS). The Future Oysters CRC-P project was developed to...
ORGANISATION:
Australian Seafood Industries Pty Ltd (ASI)
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