27 results

Development of sector-specific biosecurity plan templates and guidance documents for the abalone and oyster aquaculture industries

Project number: 2016-245
Project Status:
Completed
Budget expenditure: $59,997.00
Principal Investigator: Shane D. Roberts
Organisation: Department of Primary Industries and Regions South Australia (PIRSA)
Project start/end date: 18 Sep 2016 - 30 Nov 2017
Contact:
FRDC

Need

Although the abalone and oyster industries and relevant jurisdictions have implemented a range of measures to mitigate the risks of major diseases of concern (i.e. AVG, POMS), both industry sectors still lack a nationally consistent, agreed approach to biosecurity.

An industry-wide biosecurity plan is a critical component of health accreditation programs to facilitate safe interjurisdictional and international trade in aquatic animals. Minimum biosecurity standards must meet importing jurisdiction or country requirements, so it is vital that these plans are recognised by state government authorities and implemented by industry. Note that for interstate trade, requirements generally outline that oyster or abalone livestock only be sourced from land-based facilities with high level (auditable) biosecurity.

The abalone industry require movement of broodstock between farms to improve genetic family lines. A national Abalone Health Accreditation Program (developed by SCAAH) provides guidance for land-based abalone farms to demonstrate freedom of AVG for the purpose of trade. Biosecurity and surveillance requirements form the basis of the health accreditation program. A nationally agreed biosecurity plan (guidance document) specific to land-based abalone farms, which identifies specific disease risks and provides recommended systems to mitigate those (and potential emergent) risks, is now required to assist farmers in developing their own farm biosecurity plans.

Similarly, for the oyster industry both biosecurity and surveillance are required to demonstrate freedom of POMS (and mitigation of potential other emergent biosecurity risks). This is particularly important for consideration of movement of hatchery reared spat (juveniles) from areas of known infection to areas not known to be affected by POMS. These two fundamental requirements (biosecurity and surveillance) are outlined in South Australia’s draft import protocols for spat sourced from oyster hatcheries. Nationally agreed guidelines for oyster hatchery biosecurity plans are now required to facilitate trade in oyster spat.

Objectives

1. To develop an industry-endorsed, sector-specific biosecurity plan and relevant guidance documents for the Australian farmed abalone industry (land-based).
2. To develop an industry-endorsed, sector-specific biosecurity plan and relevant guidance documents for the Australian oyster industry (land-based).

Final report

ISBN: 978-1-876007-05-8
Authors: Matthews E. Roberts S. Deveney M. Bradley T. Dang C. Wronski E. Walker M. Savva N. and Zippel B.
Final Report • 2017-11-15 • 4.80 MB
2016-245-DLD.pdf

Summary

This project developed industry endorsed biosecurity plans and guidance documents for the abalone farming industry (land based), and Oyster hatcheries. These documents provide industry with detailed guidance to develop a new, or improve existing, farm biosecurity plans and supporting documentation. Improving biosecurity practices represents a crucial step in ensuring a profitable, secure and resilient aquaculture industry.

Documented (and in some cases auditable) farm biosecurity plans are a common requirement of health accreditation programs and livestock translocation protocols. Consequently, these guidelines will facilitate industry to trade in livestock or as an independent business decision to protect the farm, industry and community from disease incursions. Depending on the enterprise’s individual business needs and cost benefit analysis, a farm may elect to adopt some or all of the best practice biosecurity recommendations outlined in the guidance documents.

Upon Animal Health Committee (AHC) endorsement these documents will become nationally agreed guidelines and form, not only an integral part of health accreditation and translocation protocols to assist in the safe translocation of oysters and abalone, but also a fundamental means of protecting the sectors from disease risks.

This project was led by Primary Industries and Regions South Australia (PIRSA) during late 2016 and 2017 in collaboration with co-investigators from other relevant state jurisdictions as well as industry peak bodies.

Assessing occurrence of pathogenic species of the marine bacteria Vibrio in Tasmanian oysters from St Helens

Project number: 2015-042
Project Status:
Completed
Budget expenditure: $29,520.38
Principal Investigator: Tom Madigan
Organisation: SARDI Food Safety and Innovation
Project start/end date: 29 Feb 2016 - 29 Jun 2016
Contact:
FRDC

Need

This is the first time that an illness associated with Vibrio has been traced-back to Tasmanian oysters. Regrettably, this incident occurred in the only major harvesting area in Tasmania that has not been impacted by the current Pacific oyster mortality event.

In Australia the control of Vibrio is currently limited to temperature controls during storage or transport. Pre-harvest controls used by the shellfish quality assurance programs are predicated on controlling risk posed by faecal contamination and biotoxins and are not suitable for controlling risk from these naturally occurring bacteria. Although the recent implementation of the Codex Standard for pathogenic marine vibrios suggests risk in bivalve growing areas should be assessed to ascertain the risk to public health, there has been limited research undertaken in Australia. The studies undertaken to date have generally been short in nature with no comprehensive longitudinal studies being undertaken and methodologies have now progressed significantly, whereas New Zealand has been undertaking a long-term survey to understand the risk posed by these pathogens (Cruz, Hedderley & Fletcher 2015). This issue may become a risk in accessing key markets that are active in monitoring or who regulate for these pathogens.

There is an immediate need to collect information on prevalence for the remainder of the summer period to understand the risk and evaluate if there is a relationship to salinity, temperature and toxic strains. This information will be immediately useful for developing appropriate management plans in this growing region.

This illness outbreak will likely result in Tasmanian Shellfish Quality Assurance Program and the other state programs having to consider how to manage risk in the growing areas and establish what is an acceptable level. The work proposed here could be used as a framework for future work that assesses risk across the bivalve industry Australia-wide.

Objectives

1. Assess for the prevalence of pathogenic Vibrio species in the St Helens harvesting region
2. Assess for the presence of genes associated with virulence in Vibrio parahaemolyticus
3. Evaluate if a relationship exisits that between prevalance and sea water temperature and salinity

Final report

ISBN: 978-1-921563-92-8
Authors: Tom Madigan Kate Wilson Gayle Smith and Alison Turnbull

Tactical Research Fund: revision of the Australian Shellfish Quality Assurance Program manual - in light of the FRDC funded PST review report

Project number: 2013-056
Project Status:
Completed
Budget expenditure: $39,000.00
Principal Investigator: Clinton Wilkinson
Organisation: Department of Primary Industries and Regions South Australia (PIRSA)
Project start/end date: 28 May 2014 - 31 Aug 2014
Contact:
FRDC

Need

The updating of the ASQAP manual is urgently needed to ensure that guidance on shellfish management is up to date, sufficient to allow consistency in interpretation and risk assessment and is in line with best practice. The ASQAAC committee represents the Australian bivalve shellfish producers, the program managers from the relevant food safety jurisdictions and the national legislative agencies (Department of Agriculture and FSANZ). It is the key consultative group with regards to bivalve shellfish safety in Australia.

The PST event that occurred in Eastern Tasmania and Bass Strait over the last 24 months, and the FRDC funded review report into the PST incident has highlighted the need to get this national guidance manual updated. It is expected that an updated manual will be outcome focused and provide clear guidance that is internationally robust and meets best practice approaches. The updated ASQAP manual will provide the framework to the relevant state agencies in running their state shellfish safety programs.

The current ASQAP manual is outdated and it was clear from the FRDC PST review report that it urgently needs revision. This position has been accepted by ASQAAC.

Objectives

1. An updated ASQAP manual will be produced in consultation with all members of ASQAAC
2. The updated manual will be internationally peer reviewed
3. The updated manual will be endorsed by the ASQAAC for agreement by ISC

Final report

ISBN: 978-0-9953554-0-8
Author: Clinton Wilkinson

Seafood CRC: funding options for the Australian oyster industry

Project number: 2012-757
Project Status:
Completed
Budget expenditure: $45,758.79
Principal Investigator: Ewan A. Colquhoun
Organisation: Ridge Partners
Project start/end date: 30 Sep 2012 - 29 Apr 2013
Contact:
FRDC
SPECIES

Need

In Sept 2009 the industry completed a Discussion Paper regarding optional Governance Models as part if its move to "Oysters Australia." This paper identified a number of key issues:
1. LACK OF R&D INVESTMENT - the industry collects and invests a relatively small 0.22% of turnover in R&D,
2. UNCERTAINTY on R&D Spend - there is uncertainty at a number of levels about ongoing certainty of R&D funding at current levels. These concerns arise from: the effectively ‘voluntary’ nature of R&D collections from SA and Tasmania; potential legal risk regarding the collection mechanism in NSW; uncertainty regarding the long term retention of the current FRDC $ for $ funding gearing model; uncertainty about what will happen with R&D fund matching from the Seafood CRC beyond 2013/14; and industry feedback suggesting state based service models are not always meeting all growers' expectations.
3. LACK OF MARKETING & PROMOTION SPEND - industry relies solely on other organisations (SCRC, SEA and other private organisations) to promote oysters to consumers. Surveys highlight industry’s desire to better promote the oyster industry and its product. There is no mechanism in place that allows the industry to invest collectively and efficiently in marketing, industry promotion and other service (e.g. bio-security, training) activities.
4. LACK OF FUNDS to support a national full-time Executive Officer for OA.

Objectives

1. Collate & review information on existing funding mechanisms used in the oyster industry and relationship to any relevant legislation
2. Collate & review recommendations on funding required for high priority strategies for oyster industry growth
3. Collate & review recommendations (based on previous industry consultation) on preferred levy mechanisms
4. Document external stakeholder views re arrangements and options for funding mechanisms - consulting with NSW legislation and agencies (high priority), and FRDC
5. Draft and release a Briefing Paper (with 1 page summary) to Industry identifying the need for funding, levy options, and some case examples and stakeholder questionnaire feedback
6. Present at state industry meetings (August in SA, August in Tas, TBA in NSW) and document responses to Briefing Paper issues
7. Document the preferred funding option in detail, related mechanisms, rates and impacts, proposed adoption pathway, implementation process and time frame
8. Conduct a meeting (possibly teleconference) with industry leaders / key stakeholders to confirm the recommended funding option and implementation pathway
9. Conduct a meeting with stakeholders in NSW to discuss recommended funding options and implementation pathway as relevant to NSW
10. If supported funding option is a national levy, draft a short brief for the conduct of the ballot process and conduct the ballot process.
11. Draft and submit a final report of the project process and recommended outcomes for Oysters Australia

Final report

ISBN: 978-0-9874281-3-4
Author: Ewan Colquhoun
Final Report • 2014-02-01 • 821.69 KB
2012-757-DLD.pdf

Summary

Funding for industry development, operations, promotion and other industry services is increasingly important in every modern food production sector. This project sought to confirm an agreed national funding mechanism for joint R&D, marketing and promotion and administrative support for Oysters Australia (OA).

This project revealed the challenges and options that the Australian Oyster Industry faces. Oysters are losing market share even as the demands of domestic seafood consumers rise, global risks (biosecurity, genetic improvement, market competitiveness) are threatening local enterprise sustainability and viability, and growers struggle to communicate and find common approaches that invest in real responses.

The report has detailed existing funding mechanisms, related state cost impacts, and leverage options. Presentations at regional and state meetings in New South Wales, South Australia and Tasmania have opened the debate and highlighted Oysters Australia’s need to change its communication techniques so that growers are aware of its aims and achievements.

Revitalising estuaries and wetlands for carbon sequestration, biodiversity, fisheries and the community

Project number: 2012-036
Project Status:
Completed
Budget expenditure: $400,000.00
Principal Investigator: Colin Creighton AM
Organisation: Colin Creighton
Project start/end date: 29 Jun 2012 - 29 Jun 2013
Contact:
FRDC

Need

Business as usual has caused the problem we seek to address. Australian estuaries and wetlands have been under-valued and much of their ecological function has been lost due to a multitude of small, past decisions coupled with a lack of understanding of their importance and community benefits.

Connectivity loss is an issue across Australia - eg road bridges, causeways, tidal barrages, culverts, ponded pastures, bund walls. As an example, GBRMPA has mapped in excess of 1500 barriers to fish passage just in the Burdekin catchment.

These various barriers have been constructed in times past when knowledge was lacking. We now as a community appreciate the many values of coastal ecosystems and generally the community supports their repair as a means of addressing the legacy of past decisions.

At the same time, a note of caution is necessary. in many cases there has been irrevocable loss. The art form in this Australia-wide Plan will be to identify the "easy wins" - where other public or private assets are not substantially at risk, the benefits well outweigh the costs and the overwhelming community asttitude supports repair works.

Objectives

1. Use case studies in NSW and Qld that build on previous activities and that demonstrate the multiple benefits and opportunities for further investment in connectivity & wetland repair
2. Develop an Australia-wide business plan suitable for 5 year investment that focuses on the remedial works, activities, planning, institutional arrangements and legislation to retain and repair ecological function in estuarine and wetland ecosystems
3. Present within 12 months the business case to a wide range of government, industry and community stakeholders so that understanding and support is fostered for the proposed investment initiative
4. Capitalise on a whole host of prior research and wetland mapping activities so that the Australia-wide business case is well foundered and demonstrates the return on investment from repair activities

Final report

ISBN: 978–0–992366–2-2
Author: Colin Creighton
Final Report • 2013-11-10 • 1.91 MB
2012-036-DLD.pdf

Summary

This project puts forward the proposal that stakeholders and government should concentrate on repair of the more developed coastal catchments around Australia where major investment and Australian Government leadership is required to re‐establish estuary productivity.

It seeks to deliver multiple benefits to the Australian community – to increase fisheries productivity, improve coastal water quality, enhance catchment hydrology, repair coastal biodiversity, finetune flood control, re‐establish carbon sequestration and reinforce foreshore buffering against extreme events.

The business case sets out the rationale and the priority opportunities for investment, to repair and restore, under a 'no regrets' policy, estuary and inshore wetland and floodplain areas. It seeks to maximise community benefits from these important parts of our landscape while minimising costs and impacts upon adjacent land users of the coastal zone.

It builds upon the Australian love of coastal landscapes and the resources they provide and the Australian community’s and political commitment to implement major natural resources initiatives such as the Natural Heritage Trust, Caring for our Country and the Biodiversity Fund. Like Reef Rescue and the National Action Plan for Salinity and Water Quality, the business case proposes a major focus, in this case on estuaries and their wetland ecosystems.

Most importantly, through ongoing fisheries productivity, the proposed once‐off five‐year Australian Government investment will return economic benefits year in and year out that will far outweigh the $350M costs of repairing these key estuary assets. Our estimates suggest a break‐even for investment is well less than five years and from then on benefits exceed costs forever.

Further repair and management investment will be required following the proposed once‐off five‐year agenda‐setting Australian Government investment. This business plan recognises this ongoing investment need. Similar to already successful schemes in USA and UK and building on schemes already underway in NSW and Victoria, this plan proposes various instruments and systems to ensure overall benefits can be incentivised into the future. This includes empowering industry groups, private landholders, Local Governments and communities to continue the repair of coastal assets and their management.

Keywords: climate change, estuaries, business case, coastal catchments, coastal zones, fisheries productivity

Project products

Report • 23.61 MB
2012-036-revitalising Great Barrier Reef estuaries and coastal wetlands.pdf

Summary

This proposal aims to increase fisheries productivity, improve coastal water quality, enhance catchment hydrology, repair coastal biodiversity and flood control, and re-establish carbon sequestration and foreshore buffering.
 
The business case sets out the rationale and the priority opportunities for investment, to repair and restore, under a 'no regrets' policy, estuary and inshore wetland areas. It seeks to maximise community benefits from these important parts of our landscape while minimizing costs and impacts upon adjacent land users of the coastal zone.
 
It builds upon the excellent cooperation and commitment across the Great Barrier Reef community in implementing major initiatives such as Reef Rescue. It proposes a five-year government investment that will repair key assets for maximum public benefit. Equally importantly, this investment will identify how best to ensure overall benefits can be incentivised into the future, empowering industry groups, private landholders, local governments and regional natural resource management groups to continue the repair of coastal assets and their management.

Aquatic Animal Health Subprogram: development of improved molecular diagnostic tests for Perkinsus olseni in Australian molluscs

Project number: 2011-004
Project Status:
Completed
Budget expenditure: $305,561.00
Principal Investigator: Nick Gudkovs
Organisation: CSIRO Australian Animal Health Laboratory
Project start/end date: 21 Sep 2011 - 29 Aug 2014
Contact:
FRDC

Need

Improved diagnostic methods for endemic and exotic pathogens of aquatic animals have been identified as a Key Research Area in the 2009-12 FRDC AAHS R&D plan (6.2.3 Endemic and exotic aquatic animal disease diagnostics).

Since Perkinsus olseni was first described in Australian abalone by Lester and Davies in 1981, histology and culture in Ray’s medium have been the most commonly applied diagnostic procedures for detection of Perkinsus sp.. Although these tests are relatively straight forward and practical, they are general in nature and neither identifies or differentiates specific species of Perkinsus. Despite a well developed framework for the molecular characterization of Perkinsus and modern PCR based molecular tests for some of the more commercially important Perkinsus species, these have rarely been applied in Australia. The first attempts to apply molecular methods to a small number (n=40) of Perkinsus infected abalone from disease outbreaks in NSW have already revealed a new variant which probably represents a new previously unrecognized species in Australia (Reece et al. 2010). This fact and the apparent variation in pathogenicity observed with Perkinsus in different areas, has raised several questions about which Perkinsus sp. are present in commercial mollusc populations.

Given that a significant depletion of blacklip abalone (Haliotis rubra) stocks in NSW over the last 20 years has been attributed to infection with Perkinsus (FRDC Project 2004/084) and localized areas of infection occur in a number of Australian states, from South Australia to northern Western Australia, the development and implementation of highly sensitive and rapid PCR based molecular methods to identify specific species of Perkinsus is essential. The development and application of such tests is necessarily underpinned by a detailed understanding of the molecular makeup of Perkinsus in these populations which is the subject of this application.

Objectives

1. Undertake a targeted molecular, histological and cultural examination of known Perkinsus infected wild abalone populations from NSW, SA and WA to compare existing methods of detection.
2. Establish representative axenic (single species) cultures of Perkinsus sp. from infected abalone.
3. Use established PCRs and DNA sequencing methods to confirm the presence of P. olseni and determine the genetic diversity, including other Perkinsus sp. from these populations.
4. Develop and validate qPCR methods for the detection and identification of P. olseni in infected abalone.
5. Compare and evaluate the performance of the Objective 4 qPCR with existing conventional PCR methods for detection of P. olseni.

Final report

ISBN: 978-1-4863-0691-6
Author: Nick N. Godkovs

FRDC-DCCEE: ensuring that the Australian Oyster Industry adapts to a changing climate: a natural resource and industry spatial information portal for knowledge action and informed adaptation frameworks

Project number: 2010-534
Project Status:
Completed
Budget expenditure: $232,500.00
Principal Investigator: Pia Winberg
Organisation: University of Wollongong
Project start/end date: 31 Jan 2011 - 23 Dec 2012
Contact:
FRDC
SPECIES

Need

The overarching perception across scientists, coastal industries and natural resource managers is that the coastal zone is at high risk for the full range of climate change impacts from land and sea (Simms Woodroffe 2008). There is an overwhelming consensus from industry and managers that a most urgent need in achieving practical adaptive solutions to shifting and variable environmental resources is a consolidated information base of natural resources and industry resources (Simms Woodroffe 2008; Leith Haward 2010; SRCMA 2010, I&INSW comment, Colin Creighton (FRDC) comment, industry feedback). Identification of spatial information about climate change threats, industry location and production and essential environmental resources (water quality, primary production and physical locations) needs to be synthesized and cross referenced to provide for the most informed adaptation strategies.

Of the 5 specific recommendations or needs for adaptation to climate change in the oyster industry, as reviewed by the National Climate Change Adaptation Research facility (Leith and Haward 2010), the following three will be adressed here:

1) a program of coastal and estuarine monitoring in which oyster growers, regional universities and regional NRM authorities are partners
4) continued development of knowledge-action networks that include growers, industry bodies, scientists, regional NRM agencies and representatives of state and local government;
5) provision of clear and concise information that allows reciprocal understanding of the process of oyster farming and the needs of growers… and of government regulatory and approvals processes.

This proposal addresses the identified needs, or recommendations 1, 2 and 4, by developing a monitoring synthesis portal, providing knowledge action networks for industry advocacy and information for regulatory frameworks.

Objectives

1. To source and review spatially referenced data for relevance to the oyster industry and it’s response to natural resource management and climate change, and align primary and meta-data standards.
2. To engage the oyster industry in developing the content style and delivery of natural resource and industry information in an online portal, including industry sourced data from Quality Assurance Programs and Environmental Management Strategies.
3. To deliver a pilot, online, spatially-referenced, natural resource and industry information portal, making use of extensive primary data sources, meta-data standards and national spatial data delivery initiatives.
4. Identify pathways for the spatial information portal to inform governance and statutory authorities (e.g. NRM, State and LGA), monitoring programs, strategies (e.g. oyster industry and NRM strategies), planning policies (e.g. development application processes).
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