8 results
Environment
PROJECT NUMBER • 2004-091
PROJECT STATUS:
COMPLETED

Aquatic Animal Health Subprogram: further research and laboratory trials for diagnostic tests for the detection of A invadans (EUS) and A astaci (Crayfish Plague)

Crayfish plague and epizootic ulcerative syndrome are two fungal diseases that affect freshwater crayfish and freshwater finfish, respectively. Crayfish plague, which is caused by Aphanomyces astaci, is exotic to Australia, but is capable of causing massive stock losses of up to 100% which would be...
ORGANISATION:
Murdoch University

National strategy for the survival of line caught fish: assessment of post-release survival and stress physiology of barramundi (Lates calcarifer)

Project number: 2002-039
Project Status:
Completed
Budget expenditure: $77,682.00
Principal Investigator: Roland Griffin
Organisation: Department of Agriculture and Fisheries (NT)
Project start/end date: 19 Oct 2002 - 3 May 2004
Contact:
FRDC
SPECIES

Need

The recreational fishery for barramundi in the NT is regulated by seasonal closures, a minimum size and possession limits, and the increasing practice of catch and release fishing. The effectiveness of such regulations and practices is to a great degree dependent on the rate of mortality of the released fish. Released fish may die directly from the stress of capture, or from injuries received while being landed, or they may be at a higher risk of predation as they recover. Post-release mortality (also called cryptic mortality) has been described for many species worldwide but there is no estimate available for barramundi. As recreational effort increases in the NT, in line with projected population increases, there may be a need to tighten management of barramundi by output controls. Alternatively, other arrangements could be considered such as the designation of some more popular areas for catch and release fishing only. To properly assess the effectiveness of such restrictions it will be necessary to be able to estimate cryptic mortality. In situations where large catches of sub-legal size barramundi are seasonally common (such as at Shady Camp barrage, Roper Bar and Daly River Crossing) even a low rate of post-release mortality can lead to a significant increase in actual fishing mortality. At Shady Camp in 1989 and 1990 it was estimated that catch and release of small barramundi was so high that a cryptic mortality of only 10% could have caused an increase in total deaths due to fishing of almost 70% (Griffin, 1987). A study of recreational fishing in the NT in 1995 (Coleman, 1998) found that barramundi anglers caught a total of 229000 fish but retained only 94000 (41%) of them. If 20% of the released fish had died the extra fishing induced deaths would amount to 27000, an increase of 29% on the recorded fish mortality.

A recent study of line caught striped bass (Morone saxatilis) in the southern USA (Bettoli and Osborne, 1998) estimated cryptic mortality rates to be as high as 67%. Observations during the annual Barramundi Classic fishing tournament at Daly River (White, 1998) have shown a reasonably high number of tagged fish collected after being fatally injured (ie bitten in half) by sharks. Others may well have been completely consumed by the sharks or other predators such as crocodiles or birds. In some years of the tournament around 1% of the tagged fish were recovered dead during the tournament. While this does not suggest a high rate of cryptic mortality the actual number of deaths in those instances was likely to be substantially higher given the high abundance of predators capable of disposing of the evidence.

Information on stress physiology will also be of use to the aquaculture industry in understanding and managing stress in barramundi farm stock, but is of secondary consideration in this project.

Objectives

1. To assess the physiological stress imposed on barramundi by capture and release by anglers.
2. To directly assess the survival of individual barramundi caught and released by anglers.
Environment
PROJECT NUMBER • 2014-034
PROJECT STATUS:
COMPLETED

Revision of the existing AQUAVETPLAN: ‘Viral Encephalopathy and Retinopathy Disease Strategy Manual’

Australian aquatic veterinary emergency plan (AQUAVETPLAN) for Viral Encephalopathy and Retinopathy Disease can be accessed from the federal Department of...
ORGANISATION:
University of Sydney (USYD)

Aquatic Animal Health Subprogram: development of diagnostics tests for the detection of nodavirus

Project number: 2001-626
Project Status:
Completed
Budget expenditure: $185,902.00
Principal Investigator: Nicholas J. Moody
Organisation: Department of Primary Industries (QLD)
Project start/end date: 27 Feb 2002 - 30 Jun 2005
Contact:
FRDC

Need

Validate a sensitive and specific Nested RT-PCR test.

- There is a need to ensure the Nested RT-PCR test developed at OVL will detect the range of endemic nodaviruses from a variety of finfish species. It is also important to ensure the test will detect exotic nodavirus isolates for use in the event of an exotic nodavirus incursion.
- Standardisation of reagents and sample collection and preservation protocols will enable consistency of test methods between laboratories.
- A test is required to screen broodstock samples to eliminate nodavirus-positive carrier fish from production facilities. Due to the small sample sizes obtainable, the Nested RT-PCR test is the best test option.

Establishment of a cell line.

- Cell culture is considered the gold standard for virus detection. The cell culture will enable cost-effective screening of larvae for sale or release and to develop management procedures.
- Cell culture is more tolerant to sample degradation than other detection methods and allows testing of material that is unsuitable for use in other tests.
- The vast majority of cell lines currently available have been produced from temperate species. Availability of cell lines, from tropical fish species, is required.

Immunodiagnostics

- FAT tests can confirm the identity of viruses isolated in cell culture during diagnostic or surveillance activities. Their use is critical for the identification of viruses.
- Immunohistochemistry/immunofluorescence is a sensitive and specific test that can be used on fixed material. It is not always possible to obtain fresh samples and confirmation of nodavirus in tissue sections can be required. Immunohistochemistry is also a tool to identify the tissues targeted by nodavirus.

Objectives

1. To optimise and validate a sensitive and specific Nested RT-PCR test for the detection and identification of endemic and exotic nodaviruses from a range of samples and fish species.
2. To establish a cell line which can be used for the isolation, amplification and titration of endemic and exotic nodaviruses from a range fish species.
3. To produce immunodiagnostic tests, capable of localising endemic and exotic nodaviruses in fish tissues and cell cultures.
4. To distribute the above technology and protocols to laboratories as soon as optimisation and validation are complete.
5. To produce an Australian and New Zealand Standard Diagnostic Procedure for the detection of Nodavirus.

Final report

Environmentally sustainable development of barramundi cage aquaculture

Project number: 2003-026
Project Status:
Completed
Budget expenditure: $226,632.00
Principal Investigator: Brett Glencross
Organisation: Department of Primary Industries and Regional Development (DPIRD) WA
Project start/end date: 29 Jun 2004 - 30 Nov 2009
Contact:
FRDC
SPECIES

Need

Development of a major barramundi industry in Lake Argyle in the Kimberley region of WA is proceeding, with a developer obtaining approvals for a 600 tonne production licence and production rising rapidly as the fish approach market size. In the process of seeking these approvals, and also through a strategic environmental review of the opportunities for aquaculture in this area by Department of Fisheries (Report No. R700), the issue of environmental impacts by barramundi aquaculture has been considered a key-limiting factor to expansion towards a major 10,000 tonne industry in Lake Argyle. Presently, the capacity of the Lake Argyle ecosystem to sustainably maintain certain levels of barramundi cage culture is unknown and models need to be developed that will assist in determining the carrying capacity of specific areas of the lake. By comparison to other cage aquaculture scenarios in Australia, the one at Lake Argyle is largely unique, in that large-scale aquaculture in a tropical lake system is not being conducted elsewhere in Australia. However, a sound understanding of the environmental sensitivity of the Lake Argyle ecosystem is lacking. Clearly, for long-term management of this industry, an improved understanding of the level of hydrodynamic and environmental variability and key control points for environmental management of barramundi cage culture need to be defined. Similarly, critical control points of barramundi cage culture environmental discharge (both soluble and solids) also need to be more fully explored.

This project will build on from an existing project of the principal investigator’s, presently underway at Lake Argyle, auditing the nutrient discharge characteristics associated with barramundi fed existing commercial diets.

Objectives

1. To determine the environmental sensitivity of the Lake Argyle ecosystem to additional nutrients
2. To develop a diet which addresses the environmental sensitivities of the Lake Argyle ecosystem
3. To optimise feed management strategies for optimal efficiency
4. To develop carrying capacity assessment models of the Lake Argyle ecosystem

Final report

ISBN: 1 921258 14 4
Author: Brett Glencross
Final Report • 2009-07-08
2003-026-DLD.pdf

Summary

A preliminary sensory evaluation study was conducted to confirm the presence of a taint issue. Prior to this the issue was reliant on purchaser feedback and was not verified independently. To examine the issue of flavour taint a series of barramundi samples were collected from Lake Argyle (purged and unpurged), wild (estuarine) and marine-farmed barramundi were assessed. No significant differences in flavour attributes and/or acceptability attributes were detected between the wild and farmed barramundi, provided the barramundi was either marine-farmed or purged. However, it was determined that a clear “muddy” flavour and odour could be detected in the unpurged Lake Argyle fish, but not in any of the other samples. From this finding it was decided to establish an independent professional sensory panel to assess a range of key factors that may influence the sensory perception of the muddy taint issue. A number of other differences in flesh colour and texture were also observed.

The project also resulted in the establishment of a trained sensory panel at the Queensland Department of Primary Industries (QDPI) Centre for Food Technology (CFT) for the assessment of flavour-taint in barramundi. From this, cross-referencing to some untrained sensory work was also undertaken and showed that similar results could be achieved from untrained panels.

People
PROJECT NUMBER • 2002-652
PROJECT STATUS:
COMPLETED

Aquatic Animal Health Subprogram: enhancement of the emergency disease management capability in Victoria - developing a Victorian Control Centres Management Manual

AQUAVETPLAN and its associated manuals, and in particular the ‘AQUAVETPLAN Control Centres Management Manual’ provide the necessary framework for the development of a Victorian management/operational manual that would meet the planning needs in relation to aquatic animal diseases. The...
ORGANISATION:
Agriculture Victoria
Environment
PROJECT NUMBER • 1999-205
PROJECT STATUS:
COMPLETED

The effect of barramundi Nodavirus on important freshwater fishes

This project has confirmed the knowledge that management of barramundi translocations outside their natural range requires fisheries authorities take into account the risk that barramundi nodavirus may lethally infect native freshwater fishes. The project has shown barramundi nodavirus can...
ORGANISATION:
Department of Primary Industries (QLD)
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