258 results

Tactical Research Fund: Using innovative techniques to analyse trends in abundance for non-target species

Project number: 2010-057
Project Status:
Completed
Budget expenditure: $68,235.00
Principal Investigator: Malcolm Haddon
Organisation: CSIRO Oceans and Atmosphere Hobart
Project start/end date: 30 Nov 2010 - 30 Jul 2011
Contact:
FRDC

Need

EBFM requires performance indicators for a wide range of species that interact with fisheries, and systems to monitor those performance indicators. However, there is no routine monitoring of the status of the many commercially important byproduct and bycatch species. The assessment of these non-target species remains important in terms of the Commonwealth Harvest Strategy Policy and AFMA have expressed a need for a solution to how to assess the relative status of these species. Such monitoring is required for strategic assessment under the EPBC Act (1997).

Most of non-target species are not under quota and while not directly targeted they can still experience significant fishing mortality and add value to the landed catch. Currently, if they are assessed at all, the assessments merely apply the same strategies as adopted for target species. There is often a perception that CPUE should be disregarded “because the species was not targeted”. There is a need to determine whether alternative methods should be applied to such species that take into account the fact that their catch is incidental to the main activities of the fishers and hence the fishery dependent data for the non-target species will have different qualities. By definition these fisheries are multi-species in nature and this too can complicate their assessment. Technically this is not a trivial problem and more clarity is needed concerning the scope of the issue and how to deal with it. Rather than launch immediately into a relatively long term attempt at finding a solution, a more efficient approach is proposed that involves expert examination and rapid review to map the road ahead. Hence there is a need to conduct workshops aimed at clarifying the management requirements and the most cost effective approach to solving these management issues, which apply to all multi-species data poor fisheries.

Objectives

1. Test analysis methods against available datasets capable of providing trend in abundance estimates for byproduct and bycatch species
2. Conduct two workshops, aimed at identifying the management issues and the techniques available for analyzing trends in abundance in non-target species.

Final report

ISBN: 978-0-643-10812-7
Author: Malcolm Haddon

Quantitatively defining proxies for biological and economic reference points in data poor and data limited fisheries

Project number: 2010-044
Project Status:
Completed
Budget expenditure: $320,429.00
Principal Investigator: Shijie Zhou
Organisation: CSIRO Oceans and Atmosphere Hobart
Project start/end date: 30 Jun 2010 - 29 Jun 2012
Contact:
FRDC

Need

The Commonwealth harvest strategy policy requires the estimation of specific reference points for each stock to which the policy applies. Unfortunately, it is impossible to estimate directly such reference points for many stocks due to limited, or absence of, economic data as well as biological data. In most cases, this is due to the relatively small size of the fishery or the relatively low economic importance of the species concerned, making the routine collection of appropriate data too costly. The current TIER system of assessment only attends to those fisheries that can either have a detailed quantitative assessment (TIER 1), have limited biological data but some ageing data (TIER 3), or have meaningful catch and catch rate statistics (TIER 4). The methods and proxies already in place provide a means of designating a target and limit in terms of catch rates and catches. However, these reference points are only useful for those species for which catch rate data are a meaningful reflection of stock status. There are many species for which catch rates, even if available are very poor performance measures. Alternative methods and proxies need to be developed for even lower TIERs that provide for a consistent and defensible approach across all data poor fisheries. In most of these fisheries, economic data will also be absent, so some consistent means of developing meaningful and defensible target reference points needs to be developed.

Recognizing these needs, ComFRAB called for two related proposals: “Incorporating economics into harvest strategies without bioeconomic models” and “Quantitatively defining proxies for limit and target reference points in data poor fisheries”. Because these two proposals are closely linked and overlap in many ways, we opted to combine them into one single proposal. This will facilitate the team to work closely and reduce the overall project cost.

Objectives

1. Build on current work for species in data poor fisheries under harvest strategies that: (1) identify biological reference points with associated performance measures and proxies, and (2) test harvest strategies and quantitatively defines limit and / or target reference points in line with the settings of the Commonwealth Harvest Strategy Policy.
2. To identify cost-effective methods of incorporating economic indicators into biological reference points that could be determined in Objective 1.
3. To develop case studies that demonstrate how these methods could be implemented in other Australian fisheries.

Final report

ISBN: 978-0-643-10999-5
Author: Shijie Zhou

Development of a user-friendly desktop tool based on existing Atlantis runs

Project number: 2010-043
Project Status:
Completed
Budget expenditure: $85,743.00
Principal Investigator: Beth Fulton
Organisation: CSIRO Oceans and Atmosphere Hobart
Project start/end date: 31 Jul 2010 - 30 Jun 2011
Contact:
FRDC

Need

Fisheries Managers often need to rapidly explore possible impacts of a range of potential changes to a fishery (for example, changes in fuel and fish prices, biophysical, environmental and economic drivers of the fishery, and alternative fisheries management regulations). Unfortunately, the preparation and implementation time involved in an end-to-end ecosystem modeling project (e.g. the Alternative Management strategies for commonwealth fisheries) means that delivery time is typically years (likely 3-4 years) at a potential cost of millions. This is simply too slow to be of use to many of the rapid turn around questions management bodies are presented with. However, the decisions that need to be made would benefit from system-level strategic information if it were available; and fisheries managers and other stakeholders, including the fishing industry, would gain significant insights into the fishery from the ability to explore such changes without the need to undertake specific research projects.

To this end the best approach is to preemptively create a library of runs that span a large number of potential management strategies and scenarios of interest and to have it to hand as an accessible data source through a user-friendly interface that can be explored from the user’s desktop. This need has been identified by key stakeholders, like the AFMA managers and lead to the ComFRAB call for this project. In the short term this tool is best developed and applied around a library of runs set up for southeastern waters and the SESSF, but the benefit can be much broader than that – both in terms of creating a framework for future use with other Atlantis (or multispecies) model output and indirectly by providing a way of interrogating a complex marine system to gain general insights into their function and implications of different forms of management.

Objectives

1. Develop an easily accessible desktop software application to allow fisheries stakeholders to analyse ecosystem model output and gather information on potential ecological and economic impacts of changes in the fisheries system due to alternative fisheries management arrangements.

Final report

ISBN: 978-1-922173-37-9
Author: Beth Fulton

El Nemo South East: Quantitative testing of fisheries management arrangements under climate change using Atlantis

Project number: 2010-023
Project Status:
Completed
Budget expenditure: $338,202.00
Principal Investigator: Beth Fulton
Organisation: CSIRO Oceans and Atmosphere Hobart
Project start/end date: 31 Jul 2010 - 29 Jun 2014
Contact:
FRDC

Need

The south-eastern waters of Australia are predicted to be the most vulnerable area to global change, due to changes in East Australian, Leeuwin and Flinders Currents and associated increases in water temperatures; modification of local ocean processes, like coastal upwelling; sea-level rise driven threats to inshore habitats, which have critical fish nursery roles; and other threats to inshore habitats posed by simultaneous increases in salinity, river flow and stratification of shallow water bodies. Together these shifts will impact species composition of functional groups and communities in the region. Moreover it will affect the sustainability of the fisheries (commercial and recreational) and aquaculture resources, which will have social and economic flow-on effects for the businesses and communities; particularly as they will be exacerbated by changes in market conditions, input costs and food prices as global change affects consumer purchasing behaviour changes. This means there is a strong need for information that casts light on exposure and vulnerability of the region and identifies robust management and adaptation strategies. Major benefits will only be achieved if there is a means of synthesising information across all topics (ecological, economic and social) to provide system level quantitative assessments and insights. This requires a method that can easily address changing socially and economically driven human behaviour, environments, ecological components, productivity and distributions and cross-jurisdictional human activities and management. Atlantis is uniquely placed in that it can directly address all of these critical factors. The SEAP program can also benefit from the years of development that have resulted in a working Atlantis model for the SE region.

Objectives

1. Assess what the challenges are for recreational and commercial fisheries and aquaculture management arrangements in managing the interactions between fish and fishers within a changing climate
2. Identify potential barriers (for both Government and industry) to adaptation
3. Inform changes to management arrangements that provide for sustainable management of the resource, provide for efficient operation of markets, foster industry adaptation and enable businesses to manage challenges and take advantage of any emerging opportunities all in the face of uncertainty that will remain associated with climate impacts for decades to come
4. Determine how to detect significant attribute changes to inform a management response again in the face of considerable on-going uncertainty
5. Assess what the challenges are for recreational and commercial fisheries and aquaculture management arrangements in managing the interactions between fish and fishers within a changing climate

SCRC: SCRC RTG 3.11: CRC Research Travel Grant: To attend workshop at NIRS 2009 conference (Dr Malcolm Brown)

Project number: 2009-754
Project Status:
Completed
Budget expenditure: $0.00
Principal Investigator: Malcolm Brown
Organisation: CSIRO Oceans and Atmosphere Hobart
Project start/end date: 30 Sep 2009 - 29 Nov 2009
Contact:
FRDC

Final report

ISBN: 978-1-925982-31-2
Author: Malcolm Brown
Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

Final Report • 2009-11-30 • 303.19 KB
2009-754-DLD-RTG.pdf

Summary

Visible-near infrared reflectance spectroscopy (VNIRS) is a rapid, objective technique that has been used within CSIRO Food Futures (FF) Flagships projects over the past few years to assess flesh quality of animals within breeding programs. More recently, our group has applied VNIRS as part of a Seafood CRC Project (“Understanding Abalone Quality”, No: 2008/701; Miriam Fluckiger, Ph.D student) and will use this in a new Seafood CRC/FRDC Project “Incorporation of selection for reproductive condition marketability and survival into a breeding strategy for Sydney rock oysters and Pacific oysters.” (Applicant: Australian Seafood Industries and NSW Select Oyster Company).

This project aimed to enhance my (Malcolm Brown) capability in VNIRS, and apply these skills to current CRC projects. Another objective was to establish scientific networks with VNIRS expertise, as potential collaborators for current or future Seafood CRC projects. To this end, a range of activities were incorporated into the travel schedule, i.e conferences, training workshops and site visits. As the benefits from these activities were to flow to other non-CRC CSIRO projects (eg. salmon selective breeding program) CSIRO contributed the major funding to this travel grant, with the CRC providing supplementary funds to help extend the range of activities.

SCRC: SCRC RTG 3.2: Short term lab placement in Aberdeen, UK (Benita Vincent)

Project number: 2009-751
Project Status:
Completed
Budget expenditure: $0.00
Principal Investigator: Benita N. Vincent
Organisation: CSIRO Oceans and Atmosphere Hobart
Project start/end date: 30 Sep 2009 - 29 Oct 2009
Contact:
FRDC

Final report

ISBN: 978-1-925982-60-2
Author: Benita Vincent
Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

Final Report • 2009-10-30 • 66.83 KB
2009-751-DLD-RTG.pdf

Summary

To conduct a short term lab placement at the Marine Laboratories in Aberdeen to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

This research travel grant allowed the author to conduct a short term lab placement at the Marine Laboratories in Aberdeen in order to gain skills in new techniques including producing and maintaining primary cell cultures from gill explants and tissues.

Following the short term lab placement in Aberdeen, the author developed techniques to isolate and culture gill cells from Atlantic Salmon. To date, cultures have been maintained for up to 15 days. Ongoing work will involve further development of these techniques to enable isolation of high cell densities of gill cells. In addition adapting cell culture conditions to allow changes in salinity will facilitate the development of assays involving the agent of amoebic gill disease (AGD) in Atlantic Salmon, the marine amoeba, Neoparamoeba perurans. This will in the longer term enable attachment assays to be developed, potentially leading to identifying attachment receptors that may be important in disease development.

SCRC: SCRC RTG 3.1: Queensland Institute of Medical Research (QIMR) Flow of Cytometry Methods Course and Workshop (Dr Melony Sellars: Student Andrew Foote)

Project number: 2009-750
Project Status:
Completed
Budget expenditure: $0.00
Principal Investigator: Melony J. Sellars
Organisation: CSIRO Oceans and Atmosphere Hobart
Project start/end date: 30 Sep 2009 - 29 Nov 2009
Contact:
FRDC

Final report

ISBN: 978-1-925982-22-0
Author: Andrew Foote
Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Final Report • 2009-11-30 • 171.59 KB
2009-750-DLD-RTG.pdf

Summary

Develop knowledge and skills in flow cytometry to help advance the progress of my CRC project; advance my professional development; share my skills and knowledge with relevant CRC participants and projects.

Flow cytometry is a very useful tool which can be used for almost any molecular application where fluorescent stains can be used. It has the advantage of fast and accurate processing of large quantities of data, including the analysis of several different components in each of the tens to hundreds of thousands of cells processed per sample.

The objective of this travel grant was to allow the researcher to develop knowledge and skills in flow cytometry to help advance the progress of his CRC project; advance his professional development; and share his skills and knowledge with relevant CRC participants and projects.

Tactical Research Fund: Providing social science objectives and indicators to compare management options in the Queensland trawl planning process

Project number: 2009-100
Project Status:
Completed
Budget expenditure: $95,000.00
Principal Investigator: Cathy M. Dichmont
Organisation: CSIRO Oceans and Atmosphere Hobart
Project start/end date: 31 May 2010 - 29 Oct 2011
Contact:
FRDC

Need

Fisheries management has mostly been directed by economic and ecological objectives. With the introduction of the call for triple bottom line assessments of industry and government performance, a need for social objectives has become apparent which has remained largely unaddressed in terms of integration into management plans for specific fisheries.

In addition, consideration of social impacts of different management options are very important for the Queensland trawl fishery. The reason for this is that the fishery ranges from having communities where trawling is the major source of income to the opposite case where trawling is only a minor component of the community activities and income. The fishery also spans almost the whole length of the eastern Queensland coast with a complex multi-species, multi-fleet fishery which is worth about $100M - Queensland's most valuable fishery. Management options need to balance community, economic and biological needs. Any changes to the management of the fishery can substantially change the biological status of stocks, fishery profitability but also equity between fleets and communities.

Queensland DEEDI are presently developing a new draft Plan for comment and input to this is essential and urgent.

There is therefore a need for specific social objectives and associated relevant indicators for Queensland DEEDI to use in the development of management plans and the assessment of them.

Objectives

2. Test and verify applicability of social objectives and indicators using semi-quantitative analyses with stakeholder groups
3. Identify social objective and indicators of relevance to the Queensland trawl fishery

Final report

ISBN: 9780643109223
Author: Catherine Dichmont

El-Nemo SE: understanding the biophysical implications of climate change -project 1 & 2

Project number: 2009-056
Project Status:
Completed
Budget expenditure: $160,613.00
Principal Investigator: Alistair Hobday
Organisation: CSIRO Oceans and Atmosphere Hobart
Project start/end date: 30 Nov 2009 - 29 Jun 2010
Contact:
FRDC

Need

The eastern and south eastern Australian marine waters have been identified as being the most vulnerable geographic area to both climate change impacts and overall exposure in Australia. These changes are expected to have significant implications in the region.
Information on physical changes expected in south-eastern Australia are currently available only through Global Climate Models that provide coarse spatial scales of 1-2 degrees (latitude & longitude). They currently provide almost no information at the scale of coastal upwelling, eddies and fronts which are important factors driving oceanic productivity. These models currently predict global changes in a range of physical variables both in the atmosphere and in the ocean for the 20th (hindcast mode) and 21st (forecast mode) centuries and are currently used in IPCC projections.
Further refined modelling of physical drivers in this region is required to understand drivers at scales relevant to fisheries and aquaculture for driving productivity, distribution and abundance of species. While a number of national (Bluelink) and regional finer-resolution ocean models exist for the SE region (Baird et al model, NSW; Huon Estuary model, Tas; SAROM, SA), in this project outputs from two (Bluelink and SAROM) will be used to inform predictions on biomass, productivity and distributions of key fishery species.

Objectives

1. A. Extract variables from Bluelink and GCM’s for fishery regions around the SE
2. A. Validate variables derived from the Bluelink model against the IMOS and other historical data
3. A. To complete development of SAROM and validation against the IMOS and historical data for the February 2008 - March 2010 period
4. A. Compare the predictions of the two models to each other and to GCMs
5. B. Derive, extract and examine of model outputs on derived variables, including acidification levels in the SE region.
6. B. Provide these data in written and visual format to the biological and review teams for consideration

Final report

ISBN: 978-1-921826-76-4
Author: Alistair Hobday
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Organisation